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1.
2007 Accesses
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DNA methylation and transcriptional noise
Iksoo Huh, Jia Zeng, Taesung Park, Soojin V Yi Epigenetics & Chromatin 2013, 6:9 (26 April 2013)
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2.
1529 Accesses
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5-hydroxymethylcytosine and its potential roles in development and cancer
Gerd P Pfeifer, Swati Kadam, Seung-Gi Jin Epigenetics & Chromatin 2013, 6:10 (1 May 2013)
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3.
1145 Accesses
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The histone deacetylase inhibitor sodium valproate causes limited transcriptional change in mouse embryonic stem cells but selectively overrides Polycomb-mediated Hoxb silencing
Elsa Boudadi, Hannah Stower, John A Halsall, Charlotte E Rutledge, Martin Leeb, Anton Wutz, Laura P O’Neill, Karl P Nightingale, Bryan M Turner Epigenetics & Chromatin 2013, 6:11 (1 May 2013)
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4.
847 Accesses
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Endogenous mammalian histone H3.3 exhibits chromatin-related functions during development
Kelly M Bush, Benjamin TK Yuen, Bonnie L Barrilleaux, John W Riggs, Henriette O’Geen, Rebecca F Cotterman, Paul S Knoepfler Epigenetics & Chromatin 2013, 6:7 (9 April 2013)
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5.
777 Accesses
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Additional annotation enhances potential for biologically-relevant analysis of the Illumina Infinium HumanMethylation450 BeadChip array
Magda E Price, Allison M Cotton, Lucia L Lam, Pau Farré, Eldon Emberly, Carolyn J Brown, Wendy P Robinson, Michael S Kobor Epigenetics & Chromatin 2013, 6:4 (3 March 2013)
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6.
690 Accesses
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Vertebrate GAGA factor associated insulator elements demarcate homeotic genes in the HOX clusters
Surabhi Srivastava, Deepika Puri, Hita Garapati, Jyotsna Dhawan, Rakesh K Mishra Epigenetics & Chromatin 2013, 6:8 (22 April 2013)
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7.
619 Accesses
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Mitotic bookmarking by transcription factors
Stephan Kadauke, Gerd A Blobel Epigenetics & Chromatin 2013, 6:6 (2 April 2013)
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8.
602 Accesses
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Nucleosomal DNA binding drives the recognition of H3K36-methylated nucleosomes by the PSIP1-PWWP domain
Rick van Nuland, Frederik MA van Schaik, Marieke Simonis, Sebastiaan van Heesch, Edwin Cuppen, Rolf Boelens, HT Timmers, Hugo van Ingen Epigenetics & Chromatin 2013, 6:12 (8 May 2013)
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9.
584 Accesses
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Rapid analysis of heterogeneously methylated DNA using digital methylation-sensitive high resolution melting: application to the CDKN2B (p15) gene
Ida LM Candiloro, Thomas Mikeska, Peter Hokland, Alexander Dobrovic Epigenetics & Chromatin 2008, 1:7 (3 November 2008)
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10.
488 Accesses
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Functional characterization of EZH2β reveals the increased complexity of EZH2 isoforms involved in the regulation of mammalian gene expression
Adrienne Grzenda, Gwen Lomberk, Phyllis Svingen, Angela Mathison, Ezequiel Calvo, Juan Iovanna, Yuning Xiong, William Faubion, Raul Urrutia Epigenetics & Chromatin 2013, 6:3 (28 February 2013)
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11.
474 Accesses
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HIRA dependent H3.3 deposition is required for transcriptional reprogramming following nuclear transfer to Xenopus oocytes
Jerome Jullien, Carolina Astrand, Emmanuelle Szenker, Nigel Garrett, Genevieve Almouzni, John B Gurdon Epigenetics & Chromatin 2012, 5:17 (29 October 2012)
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Editor’s summary
The most recent findings from October 2012 Nobel prize winner, John Gurdon, and his lab group. This article describes the necessary deposition of histone H3.3 in order to reprogram somatic cells into pluripotent cells.
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12.
449 Accesses
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A permissive chromatin structure is adopted prior to site-specific DNA demethylation of developmentally expressed genes involved in macronuclear differentiation
Aneta Bulic, Jan Postberg, Andreas Fischer, Franziska Jönsson, Günter Reuter, Hans J Lipps Epigenetics & Chromatin 2013, 6:5 (5 March 2013)
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13.
431 Accesses
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Epigenetics & Chromatin: interactions and processes
Steven Henikoff, Frank Grosveld Epigenetics & Chromatin 2013, 6:2 (27 February 2013)
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14.
406 Accesses
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A unified phylogeny-based nomenclature for histone variants
Paul B Talbert, Kami Ahmad, Geneviève Almouzni, Juan Ausió, Frederic Berger, Prem L Bhalla, William M Bonner, W Cande, Brian P Chadwick, Simon W L Chan, George A M Cross, Liwang Cui, Stefan I Dimitrov, Detlef Doenecke, José M Eirin-López, Martin A Gorovsky, Sandra B Hake, Barbara A Hamkalo, Sarah Holec, Steven E Jacobsen, Kinga Kamieniarz, Saadi Khochbin, Andreas G Ladurner, David Landsman, John A Latham, Benjamin Loppin, Harmit S Malik, William F Marzluff, John R Pehrson, Jan Postberg et al.
Epigenetics & Chromatin 2012, 5:7 (31 May 2012)
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Editor’s summary
In response to an urgent need to rationalize the current schemes for naming histone variants, researchers from over 30 institutions worldwide have developed consistent but flexible naming rules that are informative and database-searchable.
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15.
404 Accesses
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Chromatin structure and DNA damage repair
Christoffel Dinant, Adriaan B Houtsmuller, Wim Vermeulen Epigenetics & Chromatin 2008, 1:9 (12 November 2008)
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16.
368 Accesses
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Genome-wide DNA methylation profiling of non-small cell lung carcinomas
Rejane Carvalho, Vanja Haberle, Jun Hou, Teus van Gent, Supat Thongjuea, Wilfred van IJcken, Christel Kockx, Rutger Brouwer, Erikjan Rijkers, Anieta Sieuwerts, John Foekens, Mirjam van Vroonhoven, Joachim Aerts, Frank Grosveld, Boris Lenhard, Sjaak Philipsen Epigenetics & Chromatin 2012, 5:9 (22 June 2012)
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17.
364 Accesses
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Evidence for conserved DNA and histone H3 methylation reprogramming in mouse, bovine and rabbit zygotes
Konstantin Lepikhov, Valeri Zakhartchenko, Ru Hao, Feikun Yang, Christine Wrenzycki, Heiner Niemann, Eckhard Wolf, Joern Walter Epigenetics & Chromatin 2008, 1:8 (3 November 2008)
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18.
354 Accesses
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ZBTB33 binds unmethylated regions of the genome associated with actively expressed genes
Adam Blattler, Lijing Yao, Yao Wang, Zhenqing Ye, Victor X Jin, Peggy J Farnham Epigenetics & Chromatin 2013, 6:13 (21 May 2013)
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19.
321 Accesses
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Talking to chromatin: post-translational modulation of polycomb group function
Hanneke EC Niessen, Jeroen A Demmers, Jan Voncken Epigenetics & Chromatin 2009, 2:10 (1 September 2009)
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20.
319 Accesses
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ATP-dependent chromatin remodeling in the DNA-damage response
Hannes Lans, Jurgen A Marteijn, Wim Vermeulen Epigenetics & Chromatin 2012, 5:4 (30 January 2012)
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21.
318 Accesses
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Crosstalk between SET7/9-dependent methylation and ARTD1-mediated ADP-ribosylation of histone H1.4
Ingrid Kassner, Marc Barandun, Monika Fey, Florian Rosenthal, Michael O Hottiger Epigenetics & Chromatin 2013, 6:1 (5 January 2013)
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22.
306 Accesses
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The histone 3 lysine 4 methyltransferase, Mll2, is only required briefly in development and spermatogenesis
Stefan Glaser, Sandra Lubitz, Kate L Loveland, Kazu Ohbo, Lorraine Robb, Frieder Schwenk, Jost Seibler, Daniela Roellig, Andrea Kranz, Konstantinos Anastassiadis, A Francis Stewart Epigenetics & Chromatin 2009, 2:5 (6 April 2009)
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23.
298 Accesses
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Quantitative analysis of DNA methylation at all human imprinted regions reveals preservation of epigenetic stability in adult somatic tissue
Kathryn Woodfine, Joanna E Huddleston, Adele Murrell Epigenetics & Chromatin 2011, 4:1 (31 January 2011)
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24.
279 Accesses
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Rapid genome-scale mapping of chromatin accessibility in tissue
Lars Grøntved, Russell Bandle, Sam John, Songjoon Baek, Hye-Jung Chung, Ying Liu, Greti Aguilera, Carl Oberholtzer, Gordon L Hager, David Levens Epigenetics & Chromatin 2012, 5:10 (26 June 2012)
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25.
279 Accesses
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H3K9me3-binding proteins are dispensable for SETDB1/H3K9me3-dependent retroviral silencing
Irina A Maksakova, Preeti Goyal, Jörn Bullwinkel, Jeremy P Brown, Misha Bilenky, Dixie L Mager, Prim B Singh, Matthew C Lorincz Epigenetics & Chromatin 2011, 4:12 (20 July 2011)
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26.
275 Accesses
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Tissue-specific variation in DNA methylation levels along human chromosome 1
Cecilia De Bustos, Edward Ramos, Janet M Young, Robert K Tran, Uwe Menzel, Cordelia F Langford, Evan E Eichler, Li Hsu, Steve Henikoff, Jan P Dumanski, Barbara J Trask Epigenetics & Chromatin 2009, 2:7 (8 June 2009)
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27.
271 Accesses
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Trans-generational epigenetic regulation of C. elegans primordial germ cells
Hirofumi Furuhashi, Teruaki Takasaki, Andreas Rechtsteiner, Tengguo Li, Hiroshi Kimura, Paula M Checchi, Susan Strome, William G Kelly Epigenetics & Chromatin 2010, 3:15 (12 August 2010)
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28.
270 Accesses
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Enhancers and silencers: an integrated and simple model for their function
Petros Kolovos, Tobias A Knoch, Frank G Grosveld, Peter R Cook, Argyris Papantonis Epigenetics & Chromatin 2012, 5:1 (9 January 2012)
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29.
269 Accesses
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CTCF regulates the local epigenetic state of ribosomal DNA repeats
Suzanne van de Nobelen, Manuel Rosa-Garrido, Joerg Leers, Helen Heath, Widia Soochit, Linda Joosen, Iris Jonkers, Jeroen Demmers, Michael van der Reijden, Verónica Torrano, Frank Grosveld, M Dolores Delgado, Rainer Renkawitz, Niels Galjart, Frank Sleutels Epigenetics & Chromatin 2010, 3:19 (8 November 2010)
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30.
255 Accesses
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Distinguishing epigenetic marks of developmental and imprinting regulation
Kirsten R McEwen, Anne C Ferguson-Smith Epigenetics & Chromatin 2010, 3:2 (15 January 2010)
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31.
247 Accesses
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Efficiency of Xist-mediated silencing on autosomes is linked to chromosomal domain organisation
Y Amy Tang, Derek Huntley, Giovanni Montana, Andrea Cerase, Tatyana B Nesterova, Neil Brockdorff Epigenetics & Chromatin 2010, 3:10 (7 May 2010)
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32.
224 Accesses
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Chromatin regulated interchange between polycomb repressive complex 2 (PRC2)-Ezh2 and PRC2-Ezh1 complexes controls myogenin activation in skeletal muscle cells
Lovorka Stojic, Zuzana Jasencakova, Carolina Prezioso, Alexandra Stützer, Beatrice Bodega, Diego Pasini, Rebecca Klingberg, Chiara Mozzetta, Raphael Margueron, Pier Puri, Dirk Schwarzer, Kristian Helin, Wolfgang Fischle, Valerio Orlando Epigenetics & Chromatin 2011, 4:16 (5 September 2011)
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33.
223 Accesses
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The influence of DNA sequence on epigenome-induced pathologies
Richard B Meagher, Kristofer J Müssar Epigenetics & Chromatin 2012, 5:11 (20 July 2012)
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34.
218 Accesses
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Generation of bivalent chromatin domains during cell fate decisions
Marco De Gobbi, David Garrick, Magnus Lynch, Douglas Vernimmen, Jim R Hughes, Nicolas Goardon, Sidinh Luc, Karen M Lower, Jacqueline A Sloane-Stanley, Cristina Pina, Shamit Soneji, Raffaele Renella, Tariq Enver, Stephen Taylor, Sten Eirik W Jacobsen, Paresh Vyas, Richard J Gibbons, Douglas R Higgs Epigenetics & Chromatin 2011, 4:9 (6 June 2011)
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Editor’s summary
The hypothesis that bivalently modified genes are pre-marked for subsequent activation during differentiation is questioned as being over-simplistic, as further light is shed on the generation of bivalent chromatin domains during cell fate decisions.
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35.
219 Accesses
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Tracking the mechanical dynamics of human embryonic stem cell chromatin
Elizabeth Hinde, Francesco Cardarelli, Aaron Chen, Michelle Khine, Enrico Gratton Epigenetics & Chromatin 2012, 5:20 (21 December 2012)
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36.
213 Accesses
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Global turnover of histone post-translational modifications and variants in human cells
Barry M Zee, Rebecca S Levin, Peter A DiMaggio, Benjamin A Garcia Epigenetics & Chromatin 2010, 3:22 (6 December 2010)
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37.
215 Accesses
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Histone H3 lysine 4 methylation is associated with the transcriptional reprogramming efficiency of somatic nuclei by oocytes
Kazutaka Murata, Tony Kouzarides, Andrew J Bannister, John B Gurdon Epigenetics & Chromatin 2010, 3:4 (4 February 2010)
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38.
211 Accesses
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ERG-associated protein with SET domain (ESET)-Oct4 interaction regulates pluripotency and represses the trophectoderm lineage
Leng-Siew Yeap, Katsuhiko Hayashi, M Azim Surani Epigenetics & Chromatin 2009, 2:12 (7 October 2009)
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39.
209 Accesses
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High-resolution mapping of heterochromatin redistribution in a Drosophila position-effect variegation model
Maartje J Vogel, Ludo Pagie, Wendy Talhout, Marja Nieuwland, Ron M Kerkhoven, Bas van Steensel Epigenetics & Chromatin 2009, 2:1 (29 January 2009)
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40.
212 Accesses
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Genome-wide mapping of imprinted differentially methylated regions by DNA methylation profiling of human placentas from triploidies
Ryan KC Yuen, Ruby Jiang, Maria S Peñaherrera, Deborah E McFadden, Wendy P Robinson Epigenetics & Chromatin 2011, 4:10 (13 July 2011)
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41.
197 Accesses
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An in vitro-identified high-affinity nucleosome-positioning signal is capable of transiently positioning a nucleosome in vivo
Lia E Gracey, Zhi-Ying Chen, Jay M Maniar, Anton Valouev, Arend Sidow, Mark A Kay, Andrew Z Fire Epigenetics & Chromatin 2010, 3:13 (1 July 2010)
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Editor’s summary
The introduction of a synthetic high-affinity nucleosome-positioning signal into a DNA plasmid vector in mice results in the strong yet transient positioning of nucleosomes in vivo.
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42.
197 Accesses
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Selected imprinting of INS in the marsupial
Jessica M Stringer, Shunsuke Suzuki, Andrew J Pask, Geoff Shaw, Marilyn B Renfree Epigenetics & Chromatin 2012, 5:14 (28 August 2012)
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Editor’s summary
INS, the gene encoding insulin, is imprinted in the mammary gland, suggesting a role for genomic imprinting during lactation which may be as critical for post-natal growth in mammals as imprinting in the placenta is pre-natally.
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43.
190 Accesses
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Repressive and non-repressive chromatin at native telomeres in Saccharomyces cerevisiae
Esther R Loney, Peter W Inglis, Sarah Sharp, Fiona E Pryde, Nicholas A Kent, Jane Mellor, Edward J Louis Epigenetics & Chromatin 2009, 2:18 (2 December 2009)
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44.
185 Accesses
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The male germ cell gene regulator CTCFL is functionally different from CTCF and binds CTCF-like consensus sites in a nucleosome composition-dependent manner
Frank Sleutels, Widia Soochit, Marek Bartkuhn, Helen Heath, Sven Dienstbach, Philipp Bergmaier, Vedran Franke, Manuel Rosa-Garrido, Suzanne van de Nobelen, Lisa Caesar, Michael van der Reijden, Jan Bryne, Wilfred van IJcken, J Grootegoed, M Delgado, Boris Lenhard, Rainer Renkawitz, Frank Grosveld, Niels Galjart Epigenetics & Chromatin 2012, 5:8 (18 June 2012)
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45.
185 Accesses
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Mediator regulates non-coding RNA transcription at fission yeast centromeres
Michael Thorsen, Heidi Hansen, Michela Venturi, Steen Holmberg, Genevieve Thon Epigenetics & Chromatin 2012, 5:19 (21 November 2012)
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46.
182 Accesses
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Myc and Miz-1 have coordinate genomic functions including targeting Hox genes in human embryonic stem cells
Natalia Varlakhanova, Rebecca Cotterman, Keith Bradnam, Ian Korf, Paul S Knoepfler Epigenetics & Chromatin 2011, 4:20 (4 November 2011)
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47.
176 Accesses
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Extensive epigenetic reprogramming in human somatic tissues between fetus and adult
Ryan KC Yuen, Sarah MA Neumann, Alexandra K Fok, Maria S Peñaherrera, Deborah E McFadden, Wendy P Robinson, Michael S Kobor Epigenetics & Chromatin 2011, 4:7 (5 May 2011)
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48.
167 Accesses
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Transcription-dependent silencing of inducible convergent transgenes in transgenic mice
Fernando J Calero-Nieto, Andrew G Bert, Peter N Cockerill Epigenetics & Chromatin 2010, 3:3 (19 January 2010)
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49.
168 Accesses
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Deacetylation of H4-K16Ac and heterochromatin assembly in senescence
Kévin Contrepois, Jean-Yves Thuret, Régis Courbeyrette, François Fenaille, Carl Mann Epigenetics & Chromatin 2012, 5:15 (29 August 2012)
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50.
164 Accesses
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Chromatin remodeling enzyme Brg1 is required for mouse lens fiber cell terminal differentiation and its denucleation
Shuying He, Melinda K Pirity, Wei-Lin Wang, Louise Wolf, Bharesh K Chauhan, Kveta Cveklova, Ernst R Tamm, Ruth Ashery-Padan, Daniel Metzger, Akira Nakai, Pierre Chambon, Jiri Zavadil, Ales Cvekl Epigenetics & Chromatin 2010, 3:21 (30 November 2010)
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